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Phosphatidic acid

Athanor · official

C35H69O8P · 648.9 g/mol

IUPAC name: [(2S)-2-hexadecanoyloxy-3-phosphonooxypropyl] hexadecanoate

Also called PA, dipalmitoyl phosphatidic acid, phospholipid precursor

Open in Athanor
The structure of Phosphatidic acid
Drawn from its SMILES with RDKit

Names and identifiers

IUPAC name
[(2S)-2-hexadecanoyloxy-3-phosphonooxypropyl] hexadecanoate
Synonyms
PA, dipalmitoyl phosphatidic acid, phospholipid precursor
+ 2 more

SCHEMBL14648610, (S)-3-(Phosphonooxy)propane-1,2-diyl dipalmitate

Molecular formula
C35H69O8P
Empirical formula
C35H69O8P
Molecular weight
648.9 g/mol
Exact mass
648.47301
CAS number
18656-38-7
PubChem CID
11061290
Canonical SMILES
CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)O)OC(=O)CCCCCCCCCCCCCCC
Isomeric SMILES
CCCCCCCCCCCCCCCC(=O)OC[C@@H](COP(=O)(O)O)OC(=O)CCCCCCCCCCCCCCC
InChI
InChI=1S/C35H69O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-34(36)41-31-33(32-42-44(38,39)40)43-35(37)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h33H,3-32H2,1-2H3,(H2,38,39,40)/t33-/m0/s1
InChIKey
PORPENFLTBBHSG-XIFFEERXSA-N
Molfile

Names, InChI and the identifiers from PubChem, retrieved 2026-10-14.

Calculated

Heavy atoms
44
Rings
0
Aromatic rings
0
Fraction sp³ carbons (Fsp3)
0.94
H-bond donors
2
H-bond acceptors
6 computed here · PubChem 8
Rotatable bonds
34 computed here · PubChem 36
TPSA (Ų)
119.4 computed here · PubChem 119
Formal charge
0
XLogP3
12.9 PubChem
Complexity
696 PubChem
Stereocenters
1 definedCIP: C20: S
Double-bond geometry
None specified
Point group
C1 of one 3D conformer with its hydrogens, by Athanor’s engine (as in the app)

Elemental analysis

  • C64.78%
  • H10.72%
  • O19.72%
  • P4.77%

Isotope pattern

100%648.47339%649.4769.0%650.4791.6%651.482652.485

Each peak is a nominal mass with its abundance-weighted exact mass, as a percentage of the tallest, from IUPAC natural isotope abundances.

Computed from the structure with RDKit 2026.09 when this page was built, beside PubChem's own computed values from its record; where the two differ, both are shown.

Predicted

log P
10.51 Crippen (Wildman and Crippen 1999)
log S (water solubility)
-8.24 ESOL (Delaney 2004), log mol/L
Synthetic accessibility
3.06 SA score, 1 easy to 10 hard (Ertl and Schuffenhauer 2009)

Drug-likeness: Lipinski’s rule of five

  • Molecular weight ≤ 500: 648.9
  • log P ≤ 5 (Crippen): 10.51
  • H-bond donors ≤ 5: 2
  • H-bond acceptors ≤ 10: 6

Breaks 2 of the four rules.

¹³C NMR shifts, predicted

Predictions, not measurements; each names its method. A measured log P, where a source reports one, is under Physical properties.

Safety

No GHS hazard classification was found in the sources.

Safety data sheets on the supplier’s page: Ambinter, BLD Pharm.

Always read the supplier’s safety data sheet before working with it.

Literature

Reading PubChem, OpenAlex and GSRS…

Bioactivity

Reading ChEMBL…

References

  1. ·Calculated values: computed by Athanor with RDKit 2026.09 from the structure.
  2. ·Literature on PubChem

Data last updated 2026-10-14.