Prostaglandin F2-alpha
Athanor · official
C20H34O5 · 354.5 g/mol
IUPAC name: (Z)-7-[(1R,2R,3R,5S)-3,5-dihydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]cyclopentyl]hept-5-enoic acid
Also called PGF2a, dinoprost
Names and identifiers
- IUPAC name
- (Z)-7-[(1R,2R,3R,5S)-3,5-dihydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]cyclopentyl]hept-5-enoic acid
- Synonyms
- PGF2a, dinoprost, prostaglandin F2alpha
+ 36 more
PGF2alpha, Prostaglandin F2a, amoglandin, Enzaprost, panacelan, Dinoprosta, Protamodin, l-PGF2-alpha, PGF-2alpha, PGF2-alpha, Dinoprostum, Prosmon, l-Prostaglandin F2-alpha, Prostarmon F, Prostin F2alpha, Prostin F2-alpha, cyclosin, Prostaglandin F2 alpha, 9alpha,11alpha-PGF2, U-14583, (+)-Prostaglandin F2a, PGF2 alpha, CCRIS 4253, DTXSID9022946, HSDB 3315, PGF2, Dinoprostum [INN-Latin], U 14583, Dinoprosta [INN-Spanish], UNII-B7IN85G1HY, (+)-Prostaglandin F2alpha, B7IN85G1HY, Prostin F 2 alpha, BRN 2225571, U-14,583, 9a,11a-PGF2
- Molecular formula
- C20H34O5
- Empirical formula
- C20H34O5
- Molecular weight
- 354.5 g/mol
- Exact mass
- 354.24062
- CAS number
- 551-11-1
- PubChem CID
- 5280363
- Canonical SMILES
- CCCCCC(C=CC1C(CC(C1CC=CCCCC(=O)O)O)O)O
- Isomeric SMILES
- CCCCC[C@@H](/C=C/[C@H]1[C@@H](C[C@@H]([C@@H]1C/C=C\CCCC(=O)O)O)O)O
- InChI
- InChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h4,7,12-13,15-19,21-23H,2-3,5-6,8-11,14H2,1H3,(H,24,25)/b7-4-,13-12+/t15-,16+,17+,18-,19+/m0/s1
- InChIKey
- PXGPLTODNUVGFL-YNNPMVKQSA-N
- Molfile
Names, InChI and the identifiers from PubChem, retrieved 2026-10-14.
Calculated
- Heavy atoms
- 25
- Rings
- 1
- Aromatic rings
- 0
- Fraction sp³ carbons (Fsp3)
- 0.75
- H-bond donors
- 4
- H-bond acceptors
- 4 computed here · PubChem 5
- Rotatable bonds
- 12
- TPSA (Ų)
- 98
- Formal charge
- 0
- XLogP3
- 2.7 PubChem
- Complexity
- 432 PubChem
- Stereocenters
- 5 definedCIP: C6: S · C10: R · C11: R · C14: S · C16: R
- Double-bond geometry
- C8=C9: E · C18=C19: Z
- Point group
- C1 of one 3D conformer with its hydrogens, by Athanor’s engine (as in the app)
Elemental analysis
- C67.77%
- H9.67%
- O22.57%
Isotope pattern
Each peak is a nominal mass with its abundance-weighted exact mass, as a percentage of the tallest, from IUPAC natural isotope abundances.
Computed from the structure with RDKit 2026.09 when this page was built, beside PubChem's own computed values from its record; where the two differ, both are shown.
Predicted
- log P
- 3.04 Crippen (Wildman and Crippen 1999)
- log S (water solubility)
- -3.16 ESOL (Delaney 2004), log mol/L
- Synthetic accessibility
- 3.98 SA score, 1 easy to 10 hard (Ertl and Schuffenhauer 2009)
Drug-likeness: Lipinski’s rule of five
- Molecular weight ≤ 500: 354.49
- log P ≤ 5 (Crippen): 3.04
- H-bond donors ≤ 5: 4
- H-bond acceptors ≤ 10: 4
Passes all four rules.
¹³C NMR shifts, predicted
Predictions, not measurements; each names its method. A measured log P, where a source reports one, is under Physical properties.
Safety
Danger
Most widely reported: 39 company reports to ECHA. Source [2].
Harmful or irritant
Health hazard
- H302Harmful if swallowed
- H319Causes serious eye irritation (89.7% of reports)
- H360May damage fertility or the unborn child (97.4% of reports)
- H370Causes damage to organs (89.7% of reports)
- H372Causes damage to organs through prolonged or repeated exposure (89.7% of reports)
Precautionary statements: P203, P260, P264, P264+P265, P270, P280, P301+P317, P305+P351+P338, P308+P316, P318, P319, P321, P330, P337+P317, P405, P501
Safety data sheets on the supplier’s page: Alfa Chemistry, CymitQuimica, Key Organics/BIONET.
Always read the supplier’s safety data sheet before working with it.
Spectra
- GC-MSSpectraBase
- LC-MSMassBank Europe (Exploris 480 Orbitrap (Thermo Scientific) · LC-ESI-QFT · NEGATIVE) · MassBank Europe (4000Q TRAP, Applied Biosystems · LC-ESI-QIT · NEGATIVE) · MassBank Europe (4000Q TRAP, Applied Biosystems · LC-ESI-QIT · NEGATIVE) · MassBank Europe (4000Q TRAP, Applied Biosystems · LC-ESI-QIT · NEGATIVE) · MassBank Europe (4000Q TRAP, Applied Biosystems · LC-ESI-QIT · NEGATIVE) · MassBank Europe (4000Q TRAP, Applied Biosystems · LC-ESI-QIT · NEGATIVE)
- Other MSMassBank Europe (waters xevo g2 TOF · ESI-TOF · POSITIVE) · MassBank Europe (waters xevo g2 TOF · ESI-TOF · POSITIVE)
Experimental spectra held by these sources; each link opens the source's own record.
Literature
Reading PubChem, OpenAlex and GSRS…
Bioactivity
Reading ChEMBL…
References
- [1]Hazardous Substances Data Bank (HSDB) · Public domain (US NLM) · via PubChem · retrieved 2026-10-14
- [2]European Chemicals Agency (ECHA) · ECHA legal notice: reuse with acknowledgement · via PubChem · retrieved 2026-10-14
- [3]SpectraBase · Linked only · via PubChem · retrieved 2026-10-14
- [4]MassBank Europe · Linked only · via PubChem · retrieved 2026-10-14
- [5]MassBank of North America (MoNA) · CC BY 4.0 · via PubChem · retrieved 2026-10-14
- ·Calculated values: computed by Athanor with RDKit 2026.09 from the structure.
- ·Literature on PubChem
Data last updated 2026-10-14.
