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N-Acetylgalactosamine

Athanor · official

C8H15NO6 · 221.21 g/mol

IUPAC name: N-[(2S,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]acetamide

Also called GalNAc, blood group sugar, O-glycosylation

Open in Athanor
The structure of N-Acetylgalactosamine
Drawn from its SMILES with RDKit
Harmful or irritantWarningCauses serious eye irritation

Names and identifiers

IUPAC name
N-[(2S,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]acetamide
Synonyms
GalNAc, blood group sugar, O-glycosylation
+ 37 more

alpha-GalNAc, N-acetyl-alpha-D-galactosamine, alpha-N-Acetyl-D-galactosamine, TN saccharide, alpha-GalpNAc, GalNAc-alpha, TN antigen saccharide, alpha-D-Galactopyranose, 2-(acetylamino)-2-deoxy-, 2-acetamido-2-deoxy-alpha-D-galactopyranose, TN saccharide component, 2-(acetylamino)-2-deoxy-alpha-D-galactopyranose, TN antigen saccharide component, CHEBI:40356, 00C01APN10, DTXSID70884733, RefChem:828864, GlyTouCan:G57321FI, DTXCID401024160, G57321FI, .alpha.-D-Galactopyranose, 2-(acetylamino)-2-deoxy-, N-((2S,3R,4R,5R,6R)-2,4,5-Trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-3-yl)acetamide, N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE, N-[(2S,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]acetamide, ACETYLGALACTOSAMINE, N acetyl d galactosamin, A2G, 1ax0, C8H15NO6, GalNAcalpha, UNII-00C01APN10, N-Acetylgluosamin, 2-acetamido-2-deoxy-a-D-glucopyranose, 2vmc, 4ocq, N-Acetylglucosamin, N-Acetylmannosamin, N-[(2S,3R,4R,5R,6R)-2,4,5-Trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-3-yl]acetamide

Molecular formula
C8H15NO6
Empirical formula
C8H15NO6
Molecular weight
221.21 g/mol
Exact mass
221.08994
CAS number
1811-31-0
PubChem CID
84265
Canonical SMILES
CC(=O)NC1C(C(C(OC1O)CO)O)O
Isomeric SMILES
CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1O)CO)O)O
InChI
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6+,7-,8+/m1/s1
InChIKey
OVRNDRQMDRJTHS-CBQIKETKSA-N
Molfile

Names, InChI and the identifiers from PubChem, retrieved 2026-10-14.

Calculated

Heavy atoms
15
Rings
1
Aromatic rings
0
Fraction sp³ carbons (Fsp3)
0.88
H-bond donors
5
H-bond acceptors
6
Rotatable bonds
2
TPSA (Ų)
119.3 computed here · PubChem 119
Formal charge
0
XLogP3
-1.7 PubChem
Complexity
235 PubChem
Stereocenters
5 definedCIP: C5: R · C6: S · C9: R · C12: R · C14: R
Double-bond geometry
None specified
Point group
C1 of one 3D conformer with its hydrogens, by Athanor’s engine (as in the app)

Elemental analysis

  • C43.44%
  • H6.84%
  • N6.33%
  • O43.40%

Isotope pattern

100%221.0909.4%222.0931.6%223.095224.097

Each peak is a nominal mass with its abundance-weighted exact mass, as a percentage of the tallest, from IUPAC natural isotope abundances.

Computed from the structure with RDKit 2026.09 when this page was built, beside PubChem's own computed values from its record; where the two differ, both are shown.

Predicted

log P
-3.08 Crippen (Wildman and Crippen 1999)
log S (water solubility)
0.86 ESOL (Delaney 2004), log mol/L
Synthetic accessibility
3.63 SA score, 1 easy to 10 hard (Ertl and Schuffenhauer 2009)

Drug-likeness: Lipinski’s rule of five

  • Molecular weight ≤ 500: 221.21
  • log P ≤ 5 (Crippen): -3.08
  • H-bond donors ≤ 5: 5
  • H-bond acceptors ≤ 10: 6

Passes all four rules.

¹³C NMR shifts, predicted

Predictions, not measurements; each names its method. A measured log P, where a source reports one, is under Physical properties.

Safety

Warning

Most widely reported: 3 company reports to ECHA. Source [1].

  • Harmful or irritant
  • H319Causes serious eye irritation (33.3% of reports)

Precautionary statements: P264+P265, P280, P305+P351+P338, P337+P317

View all classifications (2)
  • [1] European Chemicals Agency (ECHA)This chemical does not meet GHS hazard criteria for 66.7% (2 of 3) of all reports.
  • [1] European Chemicals Agency (ECHA) · 3 reports · WarningH319

Safety data sheets on the supplier’s page: Biorbyt, 10X CHEM, BOC Sciences.

Always read the supplier’s safety data sheet before working with it.

Spectra

Experimental spectra held by these sources; each link opens the source's own record.

Literature

Reading PubChem, OpenAlex and GSRS…

Bioactivity

Reading ChEMBL…

References

  1. [1]European Chemicals Agency (ECHA) · ECHA legal notice: reuse with acknowledgement · via PubChem · retrieved 2026-10-14
  2. [2]Human Metabolome Database (HMDB) · Linked only · via PubChem · retrieved 2026-10-14
  3. [3]MassBank of North America (MoNA) · CC BY 4.0 · via PubChem · retrieved 2026-10-14
  4. ·Calculated values: computed by Athanor with RDKit 2026.09 from the structure.
  5. ·Literature on PubChem

Data last updated 2026-10-14.