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UTP

Athanor · official

C9H15N2O15P3 · 484.14 g/mol

IUPAC name: [[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate

Also called uridine triphosphate

Open in Athanor
The structure of UTP
Drawn from its SMILES with RDKit

Names and identifiers

IUPAC name
[[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate
Synonyms
uridine triphosphate, uridine 5'-triphosphate, Uteplex
+ 35 more

DTXSID0041147, INS-316, UT0S826Z60, [[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate, Magnesium UTP, UTP, Magnesium, Triphosphate, Uridine, Mg UTP, Magnesium Uridine Triphosphate, Triphosphate, Magnesium Uridine, (((2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl)methoxy-hydroxyphosphoryl) phosphono hydrogen phosphate, RefChem:901473, DTXCID8021147, (((((((2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl)methoxy)(hydroxy)phosphoryl)oxy)(hydroxy)phosphoryl)oxy)phosphonic acid, 200-558-7, Uridine 5'-(tetrahydrogen triphosphate), 5'-UTP, Uridine 5'-triphosphoric acid, INS316, H4utp, uridine-5'-triphosphate, BRN 0071520, UTP;Uridine 5'-triphosphate, CHEMBL336296, ((2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl tetrahydrogen triphosphate, uridine5'-triphosphate, EINECS 200-558-7, UNII-UT0S826Z60, uridintriphosphat, ara UTP, 3h-uridine triphosphate, Spectrum_001697, Diquafosol Impurity 42, Spectrum2_000525, Spectrum3_001596

Molecular formula
C9H15N2O15P3
Empirical formula
C9H15N2O15P3
Molecular weight
484.14 g/mol
Exact mass
483.96853
CAS number
63-39-8
PubChem CID
6133
Canonical SMILES
C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
Isomeric SMILES
C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
InChI
InChI=1S/C9H15N2O15P3/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey
PGAVKCOVUIYSFO-XVFCMESISA-N
Molfile

Names, InChI and the identifiers from PubChem, retrieved 2026-10-14.

Calculated

Heavy atoms
29
Rings
2
Aromatic rings
1
Fraction sp³ carbons (Fsp3)
0.56
H-bond donors
7
H-bond acceptors
11 computed here · PubChem 15
Rotatable bonds
8
TPSA (Ų)
264.4 computed here · PubChem 259
Formal charge
0
XLogP3
-5.8 PubChem
Complexity
839 PubChem
Stereocenters
4 defined, 2 undefinedCIP: C6: R · C8: R · P11: undefined · P15: undefined · C23: S · C25: R
Double-bond geometry
None specified
Point group
C1 of one 3D conformer with its hydrogens, by Athanor’s engine (as in the app)

Elemental analysis

  • C22.33%
  • H3.12%
  • N5.79%
  • O49.57%
  • P19.19%

Isotope pattern

100%483.96911%484.9723.7%485.973486.976

Each peak is a nominal mass with its abundance-weighted exact mass, as a percentage of the tallest, from IUPAC natural isotope abundances.

Computed from the structure with RDKit 2026.09 when this page was built, beside PubChem's own computed values from its record; where the two differ, both are shown.

Predicted

log P
-2.5 Crippen (Wildman and Crippen 1999)
log S (water solubility)
-0.89 ESOL (Delaney 2004), log mol/L
Synthetic accessibility
4.39 SA score, 1 easy to 10 hard (Ertl and Schuffenhauer 2009)

Drug-likeness: Lipinski’s rule of five

  • Molecular weight ≤ 500: 484.14
  • log P ≤ 5 (Crippen): -2.5
  • H-bond donors ≤ 5: 7
  • H-bond acceptors ≤ 10: 11

Breaks 2 of the four rules.

¹³C NMR shifts, predicted

Predictions, not measurements; each names its method. A measured log P, where a source reports one, is under Physical properties.

Safety

No GHS hazard classification was found in the sources.

Safety data sheets on the supplier’s page: BOC Sciences, Alfa Chemistry, Quality Control Solutions (QCS Standards).

Always read the supplier’s safety data sheet before working with it.

Spectra

Experimental spectra held by these sources; each link opens the source's own record.

Literature

Reading PubChem, OpenAlex and GSRS…

Bioactivity

Reading ChEMBL…

References

  1. [1]Human Metabolome Database (HMDB) · Linked only · via PubChem · retrieved 2026-10-14
  2. [2]SpectraBase · Linked only · via PubChem · retrieved 2026-10-14
  3. [3]MassBank Europe · Linked only · via PubChem · retrieved 2026-10-14
  4. [4]MassBank of North America (MoNA) · CC BY 4.0 · via PubChem · retrieved 2026-10-14
  5. ·Calculated values: computed by Athanor with RDKit 2026.09 from the structure.
  6. ·Literature on PubChem

Data last updated 2026-10-14.