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Biliverdin

Athanor · official

C33H34N4O6 · 582.6 g/mol

IUPAC name: 3-[2-[[3-(2-carboxyethyl)-5-[(4-ethenyl-3-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl]methylidene]-5-[(4-ethenyl-3-methyl-5-oxopyrrol-2-yl)methylidene]-4-methylpyrrol-3-yl]propanoic acid

Also called biliverdin IXalpha, bile pigment, heme catabolite, green bile

Open in Athanor
The structure of Biliverdin
Drawn from its SMILES with RDKit

Names and identifiers

IUPAC name
3-[2-[[3-(2-carboxyethyl)-5-[(4-ethenyl-3-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl]methylidene]-5-[(4-ethenyl-3-methyl-5-oxopyrrol-2-yl)methylidene]-4-methylpyrrol-3-yl]propanoic acid
Synonyms
biliverdin IXalpha, bile pigment, heme catabolite
+ 1 more

green bile

Molecular formula
C33H34N4O6
Empirical formula
C33H34N4O6
Molecular weight
582.6 g/mol
Exact mass
582.24783
CAS number
114-25-0
PubChem CID
59687184
Canonical SMILES
CC1=C(C(=CC2=C(C(=C(N2)C=C3C(=C(C(=O)N3)C=C)C)C)CCC(=O)O)NC1=CC4=NC(=O)C(=C4C)C=C)CCC(=O)O
Isomeric SMILES
CC1=C(C(=CC2=C(C(=C(N2)C=C3C(=C(C(=O)N3)C=C)C)C)CCC(=O)O)NC1=CC4=NC(=O)C(=C4C)C=C)CCC(=O)O
InChI
InChI=1S/C33H34N4O6/c1-7-20-16(3)26(36-32(20)42)13-24-18(5)22(9-11-30(38)39)28(34-24)15-29-23(10-12-31(40)41)19(6)25(35-29)14-27-17(4)21(8-2)33(43)37-27/h7-8,13-15,34-35H,1-2,9-12H2,3-6H3,(H,36,42)(H,38,39)(H,40,41)
InChIKey
KAKJNXOGVQSDEP-UHFFFAOYSA-N
Molfile

Names, InChI and the identifiers from PubChem, retrieved 2026-10-14.

Calculated

Heavy atoms
43
Rings
4
Aromatic rings
2
Fraction sp³ carbons (Fsp3)
0.24
H-bond donors
5
H-bond acceptors
4 computed here · PubChem 7
Rotatable bonds
11
TPSA (Ų)
164.7 computed here · PubChem 161
Formal charge
0
XLogP3
2.5 PubChem
Complexity
1530 PubChem
Stereocenters
None
Double-bond geometry
None specified
Point group
C1 of one 3D conformer with its hydrogens, by Athanor’s engine (as in the app)

Elemental analysis

  • C68.03%
  • H5.88%
  • N9.62%
  • O16.48%

Isotope pattern

100%582.24838%583.2518.2%584.2541.3%585.256586.259

Each peak is a nominal mass with its abundance-weighted exact mass, as a percentage of the tallest, from IUPAC natural isotope abundances.

Computed from the structure with RDKit 2026.09 when this page was built, beside PubChem's own computed values from its record; where the two differ, both are shown.

Predicted

log P
3.06 Crippen (Wildman and Crippen 1999)
log S (water solubility)
-4.83 ESOL (Delaney 2004), log mol/L
Synthetic accessibility
4.08 SA score, 1 easy to 10 hard (Ertl and Schuffenhauer 2009)

Drug-likeness: Lipinski’s rule of five

  • Molecular weight ≤ 500: 582.66
  • log P ≤ 5 (Crippen): 3.06
  • H-bond donors ≤ 5: 5
  • H-bond acceptors ≤ 10: 4

Breaks 1 of the four rules.

¹³C NMR shifts, predicted

Predictions, not measurements; each names its method. A measured log P, where a source reports one, is under Physical properties.

Safety

No GHS hazard classification was found in the sources.

Always read the supplier’s safety data sheet before working with it.

Literature

Reading PubChem, OpenAlex and GSRS…

Bioactivity

Reading ChEMBL…

References

  1. ·Calculated values: computed by Athanor with RDKit 2026.09 from the structure.
  2. ·Literature on PubChem

Data last updated 2026-10-14.